Chives are an herb, green onions are part of...well an onion. They are often used in similar ways and in similar dishes. You can substitute one for the others in most cases, but I could not say they are interchangeable. They have distinct flavors and it will change the dish to change the ingredient.
Also do not attempt to replace green onion with dried chives 1-to-1 (or fresh chives for that matter). Dried chives, not uncommonly found in pre-packaged spice racks, have about as much flavor as straw and will not deliver the desired result (unless you like straw).
I've never tried to store them myself, but one of the books that I got when I started gardening was the "Encyclopedia of Country Living", which is loaded with information on growing, canning, storing, etc. Its recommendations for globe onions is a follows (minus the typos of my transcribing):
Curing Bulbs. Let them sun-cure for 3 days. Spread them out on top of the ground until tops are thoroughly dry. Then sort. Bulbs that addicentially got cut with the space go into the house to be used soon. Sets that for some reason didn't take off are cured some more (maybe 2 weeks in a shady, airy place) and then saved to be given another chance next year. They often make it the second time they are planted. The winter storage onions are cured some more and then bagged for keeping.
Storing. If properly cured and stored in a dry, airy place, many of your winter-keeper onions will last 4 or even 6 months. Every summer we bring in onions from sets by the gunnysackful for our winter supply. The trick is to sure them very well in the sun for 3 days or so before bringing in. Rip off the "set" portion before drying if you can. The onion grown from a set has 2 parts. One is small and extends up into the a stiff hollow stem. That is the part you should rip off -- or else the onions won't keep long.
After you bring your onions in from the field, continue drying them. We have tried all sorts of systems for this. You can braid them by the dry stems and hang them up in bunches with wire or twine around the bunch. Or them them in an "onion"-type bag or into old pantyhose and hang them up. My current method, and easiest one yet, is to dump them into cardboard boxes and bring them into the kitchen. I check them occassionally by running my hands through the boxes and removing any damp ones. Any onion that feels the least bit damp is on the verge of spoiling. When the rest are absolutely bone-dry from the kitchen's heat (once that old wood cookstove starts going, it really gives them the treatement), they can go under the bed or into the attic -- anywhere they won't freeze and will stay dry.
Slight freezing doesn't hurt them, provided you don't handle them while frozen. Good ventilation is very important to their storage place, and what's why they should be in some sort of loosely woven bag or hanging basket.or braided and hung up or some such, although I get away with a box. They do better stored dry and cool than dry and hot because with too much heat, they have a tendancy to gradually dry away to layer upon layer of papery nothingness as winter goes by.
When we use our big winter onions, we take the largest first and gradually work our way down in size. That way, if there are any left over come spring, they will be small ones suitable to use as sets in the spring planting.
I should also note that I've seen the pantyhose method in use before, I think at my godparent's place. They had loaded an onion into the toe of the stocking, tied a knot, loaded in the next one, tied a knot, etc, so the onions didn't actually touch which might affect their drying out, and then hung them up so they weren't touching anything.
Best Answer
I believe that advice is mainly meant for people storing a large quantity of potatoes and onions (like two 10lbs bags) for long periods of time (like 2-3 months). I can't imagine it applies to a few potatoes and onions stored in a basket.
I have a pantry which is consistently between 60F and 68F, with a humidity of 60% to 80%. I have stored potatoes and onions together in a hanging wire basket for up to 4 weeks at a time. While the potatoes will turn green and sprout in that time (I buy organic) the onions are still good (although somewhat stronger after a month).
So my answer is: ignore that advice.