I suspect "warm" is meant to maintain temperature, rather than raise it. My crock pots are too ancient to have anything other than "high" and "low", so I can't assert any real authority. However, if you reach 145F within the first hour at the highest setting, then keep it at "warm", and test the temperature after about 30 minutes with an instant-read thermometer and it stays around 140-160F, you'll probably be fine. Personally, I'd test the temperature first by cooking water.
If the temperature stays above 140F at low, the worst risk you'll have is overcooking. Beans and vegetables like carrots and celery can overcook fairly easily in a crock pot, but higher collagen meats meant for stews tend to be fine when cooked for extended periods. Most crock pot recipes for stews and soups usually hold fine when at low for a full workday, although that's presuming a somewhat 70s-era soup aesthetic, which is probable for a crockpot recipe.
However, I would be inclined to attempt the recipe using the low setting rather than reducing it to warm, if you're not going to test the temperature first. If it turns out to be overcooked, you can always puree the ingredients with a blender...
I also doubt that switching to "warm" would be dramatically less likely to overcook the food than "low", unless it holds at a pretty stable 140F, and low ends up somewhere around 160F.
If you need the eggs raw, you could submerge them in boiling water for 5 sec. That would kill any bacteria on the shell and the egg would still be raw inside. Put the eggs in cold water right away to prevent the egg from heating up by the residual heat in the shell. I have tried this many times and the eggs do not cook.
If you are serving the eggs to very young children, pregnant women or someone who are sick, you should buy pasteurized eggs instead. But normally it's safer to eat eggs from chickens you raise, than the ones from a factory, because they are more healthy and their immune system is well developed enough to kill the salmonella itself.
Best Answer
Is the meat cooked or not ? it's not clear.
I would prepare the stuffing, cook it all and cool it down and stuff the cannelloni and put that in the fridge.
Personally, I would bake it all, sauce included the day before and cool it down and put that in the fridge. (I treat that the same as a lasagna).