[SalesForce] Too many query rows: 50001

Try cutting your batch size down. Make sure you process records in the execute method.

------- EDIT -------

global void execute(Database.BatchableContext BC, List<sObject> scope){
    // process records here
    // only query records that pertain to the scope
}

global void finish(Database.BatchableContext BC){
    // the finish method is to do things once all the batches are complete
    // for example, send an email describing how the batch process went
}

http://www.salesforce.com/us/developer/docs/apexcode/Content/apex_batch_interface.htm

The Database.executeBatch method takes two parameters: An instance of a class that implements the Database.Batchable interface. The Database.executeBatch method takes an optional parameter scope. This parameter specifies the number of records that should be passed into the execute method. Use this parameter when you have many operations for each record being passed in and are running into governor limits. By limiting the number of records, you are thereby limiting the operations per transaction. This value must be greater than zero. If the start method returns a QueryLocator, the optional scope parameter of Database.executeBatch can have a maximum value of 2,000. If set to a higher value, Salesforce chunks the records returned by the QueryLocator into smaller batches of up to 2,000 records. If the start method returns an iterable, the scope parameter value has no upper limit; however, if you use a very high number, you may run into other limits.

One has to be very careful when using a SOQL query in a loop to make sure you don't run into the TOO MANY SOQL QUERIES error -- you need a guarantee that the outer loop has a sufficiently small number of records to iterate over. And using some clever scheme with maps can get the SOQL query out of the loop. But you're not running into this problem (yet). The issue is the current batch size (default = 200) requires you to query too many records. Two solutions:

1. Lower the batch size (to 100 or 50) until it works. But try to have an estimate of how many records you'll query given a certain batch size so you know you won't run into errors at runtime (now and in the future).
2. You may be querying non-related records. Try refining your queries to only query records that are necessary.

-------- EDIT #2 ------

Here's an example of a method I use to send a nice email describing a batch process to be used in its finish method

public class util{

    public static Messaging.SingleEmailMessage finishEmail(Database.BatchableContext BC){
        messaging.singleEmailMessage mail = new messaging.singleEmailMessage();
        AsyncApexJob a = [SELECT Id,
                                 Status,
                                 NumberOfErrors,
                                 JobItemsProcessed,
                                 TotalJobItems,
                                 CompletedDate,
                                 ExtendedStatus,
                                 ApexClass.name,
                                 CreatedBy.Email,
                                 CreatedBy.Name
                          FROM AsyncApexJob 
                          WHERE Id =:BC.getJobId()];
        mail.setToAddresses(new string[]{a.CreatedBy.Email});
        mail.setReplyTo('yourEmail@someDomain.com');
        mail.setSubject('Batch Code Complete -- '+a.ApexClass.name);
        mail.setUseSignature(false);

        string td1='"border:1px solid green; width=200px;"';
        string td2='"width=200px; border:1px solid green; background-color:red; color:white; font-weight:bold;"';
        string tdHead='"border:1px solid green; width=200px; color:white; background-color:green; font-weight:bold;"';
        string ExtendedStatus='';
        if(a.ExtendedStatus!=null)
            ExtendedStatus=a.ExtendedStatus;
        string tdErrors=td1;
        if(a.NumberOfErrors>0)
            tdErrors=td2;
        string htmlBody = '<div style="border:2px solid green; border-radius:15px;"><p>Hi,</p><p><span style="color:brown; font-weight:bolder;">Salesforce</span> completed running <b>Apex Batch Code<>/b>.</p>'
        +'<p>Results:</p>'
        +'<center><table style="border:3px solid green; border-collapse:collapse;">'
        +'<tr><td style='+tdHead+'>Class Name</td><td style='+tdHead+'>'+a.ApexClass.name+'</td></tr>'
        +'<tr><td style='+td1+'>Completed Date</td><td style='+td1+'>'+a.CompletedDate+'</td></tr>'
        +'<tr><td style='+td1+'>Status</td><td style='+td1+'>'+a.Status+'</td></tr>'
        +'<tr><td style='+td1+'>Job Items Processed</td><td style='+td1+'>'+a.JobItemsProcessed+' / '+a.TotalJobItems+'</td></tr>'
        +'<tr><td style='+td1+'>NumberOfErrors</td><td style='+tdErrors+'>'+a.NumberOfErrors+'</td></tr>'
        +'<tr><td style='+td1+'>Extended Status</td><td style='+td1+'>'+ExtendedStatus+'</td></tr>'
        +'<tr><td style='+tdHead+'>Created By</td><td style='+tdHead+'>'+a.CreatedBy.Name+' ('+a.CreatedBy.Email+')</td></tr>'
        +'</table></center>'
        +'<p>Enjoy the <b>results</b>!</p><p><span style="font-family:"Courier New", Courier, monospace; color:green; font-weight:bold; font-size:larger;">Scott</span></p></div>';

        mail.setHtmlBody(htmlBody);
        return mail;
    }//END finishEmail

}//END class

Test code:

@isTest
public class Util_test{

    @isTest private static void testFinishEmail_Batch(){
        list<Account> accts=new list<Account>();
        for(integer i=0;i<(math.round(math.random()*200)+1);i++)
        accts.add(new Account(Name='test'+string.valueof(i)));
        insert accts;
        test.startTest();
        id batchInstance=database.executeBatch(new test_Batch());
        test.stopTest();
    }//END testFinishEmail_Batch
}

With test_Batch_code:

global class test_Batch implements database.Batchable<sObject>{
    global final string query;

    global test_Batch(){
        query='SELECT id FROM Account';
    }//END test

    global database.QueryLocator start(database.BatchableContext BC){
        return database.getQueryLocator(query);
    }//END start

    global void execute(database.BatchableContext BC,list<sObject> scope){
    }//END execute

    global void finish(database.BatchableContext BC){
        Util.finishEmail(BC);  // <----  ** The finishEmail method **
    }//END finish

}//END test_Batch