Minecraft – How to keep monsters out of the nether regions

Since version 1.5, this hasn't been much of an issue, as that release introduced a rule in the mobs' AI to avoid rails unless they are chasing after the player. Although I have still found Zombie Pigmen appearing on the tracks, this is now not as much of an issue as it was in previous versions.

Zombie Pigmen are able to spawn on rail tracks, so removing the walking path on the side will do nothing. But as has been mentioned, adding blocks above your tracks will prevent them from spawning and help keep them from walking onto your tracks 100% of the time. This is a common "fix", and has been around for quite a while, and it doesn't seem like the developers have any plans to stop this fix from being possible.

The following blocks can safely be placed above the tracks, and will not suffocate you:

• Glass panes (I would really recommend this one, since they are "cheaper" than glass blocks, works with stained glass panes as well)
• Glass blocks (works with stained glass as well)
• Glowstone blocks
• Leaf blocks
• Iron bars
• Fences (of all materials)
• Half-slabs (of all materials, note that they must be single, NOT double slabs)
• Stairs (of all materials)
• Trap doors
• Pistons (both extended and retracted)

There are other blocks that would work, such as Beds, Chests, TNT, or Enchantment Tables, but I have excluded them from the list due to being impractical.

You don't have to obstruct every area in your enclosed redstone circuits. You can easily place normal torches and/or Glowstone blocks throughout the enclosure. This will also aid in visibility within your ICs. Redstone can be placed on glowstone blocks, but they exhibit interesting properties, so be careful

Redstone can be put on glowstone, but being a transparent block signals can pass from one block to diagonally another with glowstone "blocking but not blocking" it, making possible nearly instant vertical redstone and new vertical logic gate designs.