Minecraft – way to get Not Enough Items to recognize foreign crafting tables

If you attach a logistic chassis with an extractor module (either mark 1 or 2) to the side of the furnace it will extract any excess products from the furnace and send them to the default route, do not worry about the extractor module taking items that the crafting pipe was waiting for as it has a lower priority so will not take the items unless no other pipe wants it.

You can simply use Wood Golems.(Also from Thaumcraft) Place them on a chest you want them to put the stuff in and they will collect for you.